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RedMD (Reduced Molecular Dynamics)
RedMD is an open source package for molecular dynamics simulations and normal mode analysis of coarse-grained models of proteins and nucleic acids. Force fields are based on one-bead elastic network models and their extensions. Surface Diver
Surface Diver allows describing, comparing, and classifying proteins according to their physicochemical properties without the need of prior 3D structural alignment. Document Actions |
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